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Postdoc and staff positions in omics data analysis and database development

Company: International Association for Great Lakes Research
Location: Ann Arbor
Posted on: May 3, 2021

Job Description:

Postdoc and staff positions in omics data analysis and database development

University of Michigan

Ann Arbor, MI

Closing Date: Until Filled

Web Address: https://sites.lsa.umich.edu/geomicro/opportunities/

Description

The Geomicrobiology Lab at the University of Michigan (https://sites.lsa.umich.edu/geomicro/) is recruiting for multiple positions (postdoc and BS/MS level, part time or full-time) involving the analysis and synthesis of omics data from the Laurentian Great Lakes.

The goal is to integrate Great lakes omics and environmental data through development of a novel research database, in collaboration with the Cooperative Institute of Great Lakes Research and the NOAA Great Lakes Environmental Research Lab.

Positions are available immediately but later start dates will be considered.

Primary responsibilities will include one or more of the following:

  • analysis of metagenomic and metatranscriptomic data (assembly, binning, annotation)
  • quantitative/statistical analysis of 'omics data in the context of environmental data
  • conceptual design of a research database for integrating data from 'omics, the environment, and experiments from the lab and field
  • development and testing of the database including design of queries, outputs, and data visualization
  • design and implementation of a database user interface
  • data retrieval and curation
  • project coordination and interaction with collaborators

Qualifications

Required qualifications:

  • BS in microbiology, bioinformatics, or related field
  • Experience with unix or programming (perl, python, java, or related languages)

Desired qualifications:

  • MS or PhD in microbiology, bioinformatics, or related field
  • Experience with database design and development and associated frameworks and languages (Django, SQL, neo4j, etc.)
  • Data visualization experience (R shiny, etc)
  • Biostatistics expertise
  • Working knowledge of R/R studio
  • Experience with analysis of metagenomic data from microbiomes

How to Apply

Positions are available immediately but later start dates will be considered.

Review of applications will start April 29th and continue until the positions are filled. Please send (1) a cover letter addressing your interest and qualifications; (2) curriculum vitae; (3) contact information for 2-3 professional references to Greg Dick (gdick@umich.edu).

Contact

Greg Dick

Department of Earth and Environmental Sciences, University of Michigan

.(JavaScript must be enabled to view this email address)

Keywords: International Association for Great Lakes Research, Ann Arbor , Postdoc and staff positions in omics data analysis and database development, Other , Ann Arbor, Michigan

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